{"id":7608,"date":"2020-09-01T10:59:35","date_gmt":"2020-09-01T02:59:35","guid":{"rendered":"http:\/\/www.leadingtec.cn\/?p=7608"},"modified":"2020-09-01T10:59:35","modified_gmt":"2020-09-01T02:59:35","slug":"whole-genome-sequencing-of-freshwater-eukaryotic-microalgae","status":"publish","type":"post","link":"https:\/\/www.leadingtec.cn\/whole-genome-sequencing-of-freshwater-eukaryotic-microalgae.html","title":{"rendered":"\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210"},"content":{"rendered":"<p style=\"text-align: center;\"><strong>\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210<\/strong><\/p>\n<p>\u3000\u3000<em>\u8d85\u5fae\u578b\u6d6e\u6e38\u85fb\u7c7b\uff08\u7c92\u5f84\u22643\u03bcm\uff09\u7b80\u79f0\u8d85\u5fae\u85fb\uff0c\u5e7f\u6cdb\u5206\u5e03\u4e8e\u6d77\u6d0b\u548c\u6de1\u6c34\u751f\u6001\u7cfb\u7edf\u4e2d\uff0c\u5728\u6c34\u751f\u751f\u6001\u7cfb\u7edf\u5c24\u5176\u662f\u5fae\u98df\u7269\u73af\u4e2d\u8d77\u7740\u91cd\u8981\u4f5c\u7528\u3002\u5b83\u4eec\u5177\u6709\u66f4\u9ad8\u7684CO2\u56fa\u5b9a\u6548\u7387\uff0c\u5bf9\u6c34\u4f53\u521d\u7ea7\u751f\u4ea7\u529b\u7684\u8d21\u732e\u91cf\u53ef\u9ad8\u8fbe90%\uff0c\u5e76\u4e14\u5176\u6f5c\u5728\u7684\u6df7\u5408\u8425\u517b\u4ee3\u8c22\u529f\u80fd\u5bf9\u6d6e\u6e38\u7ec6\u83cc\u7684\u79cd\u7fa4\u5177\u6709\u91cd\u8981\u8c03\u63a7\u4f5c\u7528\u3002<\/em>Mychonastes homosphaera\u662f\u957f\u6c5f\u4e2d\u4e0b\u6e38\u5bcc\u8425\u517b\u5316\u6e56\u6cca\uff08\u5de2\u6e56\uff0c\u9131\u9633\u6e56\uff09\u5e38\u89c1\u7684\u4f18\u52bf\u8d85\u5fae\u771f\u6838\u85fb\uff0c\u4f46\u5176\u5bf9\u5bcc\u8425\u517b\u5316\u6e56\u6cca\u7684\u9002\u5e94\u53ca\u8fdb\u5316\u673a\u5236\u5c1a\u672a\u5f97\u5230\u9610\u660e\u3002\u4e2d\u56fd\u79d1\u5b66\u9662\u5357\u4eac\u5730\u7406\u4e0e\u6e56\u6cca\u7814\u7a76\u6240\u53f2\u5c0f\u4e3d\u7814\u7a76\u56e2\u961f\u57fa\u4e8e\u6d41\u5f0f\u7ec6\u80de\u5206\u9009\u6280\u672f\u53ca\u5212\u7ebf\u5206\u79bb\u6cd5\uff0c\u6210\u529f\u83b7\u5f97Mychonastes homosphaera\u85fb\u682a\uff0c\u5e76\u5bf9\u5206\u79bb\u81ea\u5178\u578b\u5bcc\u8425\u517b\u5316\u6e56\u6cca\u5de2\u6e56\u7684\u8d85\u5fae\u771f\u6838\u85fbMychonastes homosphaera\u8fdb\u884cPacBio\u4e09\u4ee3\u6d4b\u5e8f\uff0c\u9996\u6b21\u5b8c\u6210\u6e56\u6cca\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u5de5\u4f5c\uff0c\u63ed\u793a\u4e86Mychonastes homosphaera\u5bf9\u5bcc\u8425\u517b\u5316\u6e56\u6cca\u7684\u8fdb\u5316\u53ca\u9002\u5e94\u673a\u5236\u3002<\/p>\n<p><strong>\uff081\uff09\u56e2\u961f\u5229\u7528PacBio\u4e09\u4ee3\u6d4b\u5e8f\u6280\u672f\u5bf9Mychonastes homosphaera\u5168\u57fa\u56e0\u7ec4\u8fdb\u884c\u6d4b\u5e8f\uff0c\u83b7\u5f97\u4e865.8 Gb\u6709\u6548\u5e8f\u5217\uff0c\u7ec4\u88c5\u51fa\u4e86Contig N50\u4e3a2 Mb\u768424.23 Mb\u57fa\u56e0\u7ec4\u5e8f\u5217\u3002\u57fa\u56e0\u7ec4\u6ce8\u91ca\u7ed3\u679c\u663e\u793a20.13%\u7684\u5e8f\u5217\u4e3a\u91cd\u590d\u5e8f\u5217\uff0c\u86cb\u767d\u7f16\u7801\u57fa\u56e06649\u4e2a\u3002<\/strong><\/p>\n<p><strong>\u3000\u3000\uff082\uff09\u57fa\u56e0\u7ec4\u76f8\u5173\u4ee3\u8c22\u901a\u8def\u6784\u5efa\u7ed3\u679c\u8868\u660e\uff0cMychonastes homosphaera\u4e0d\u4ec5\u6709\u9ad8\u6548\u7684\u8425\u517b\u53ca\u5149\u80fd\u5229\u7528\u673a\u5236\uff0c\u8fd8\u5177\u6709\u7279\u6709\u7684\u4f4e\u6e29\u9002\u5e94\u673a\u5236\uff0c\u9610\u660e\u4e86\u5176\u5728\u5de2\u6e56\u51ac\u5b63\u4f18\u52bf\u7684\u673a\u7406\u3002<\/strong><\/p>\n<p><strong>\u3000\u3000\uff083\uff09\u901a\u8fc7\u6bd4\u8f83\u57fa\u56e0\u7ec4\u5b66\uff0c\u5206\u6790\u4e86Mychonastes homosphaera\u548c\u5176\u4ed6\u85fb\u7c7b\u57fa\u56e0\u7ec4\u4e2d\u6cb9\u8102\u5408\u6210\u4ee3\u8c22\u9014\u5f84\u57fa\u56e0\u7684\u7ec4\u6210\u548c\u62f7\u8d1d\u6570\uff0c\u89e3\u91ca\u4e86Mychonastes homosphaera\u9ad8\u6cb9\u8102\u542b\u91cf\u7684\u539f\u56e0\u3002\u800c\u5e7f\u6cdb\u7684\u78b3\u6e90\u9009\u62e9\u3001\u9ad8\u6548\u7684\u5149\u5408\u901f\u7387\u548c\u65fa\u76db\u7684\u751f\u957f\u901f\u7387\uff0c\u8ba9Mychonastes homosphaera\u6210\u4e3a\u5fae\u85fb\u80fd\u6e90\u751f\u4ea7\u7684\u6f5c\u529b\u85fb\u79cd\u3002<\/strong><\/p>\n<p><strong>\u3000\u3000\uff084\uff09Mychonastes homosphaera\u57fa\u56e0\u5bb6\u65cf\uff0c\u57fa\u56e0\u95f4\u9694\u4ee5\u53ca\u5185\u542b\u5b50\u6570\u76ee\u7684\u51cf\u5c11\uff0c\u63ed\u793a\u4e86\u85fb\u7c7b\u8fdb\u5316\u8fc7\u7a0b\u4e2d\u201cGenome streamlining\u201d\u73b0\u8c61\u3002<\/strong><\/p>\n<p>Mychonastes homosphaera\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u7684\u5b8c\u6210\uff0c\u4e3a\u85fb\u7c7b\u57fa\u56e0\u7ec4\u5b66\u7814\u7a76\u63d0\u4f9b\u4e30\u5bcc\u7684\u6570\u636e\u8d44\u6e90\uff0c\u6709\u52a9\u4e8e\u85fb\u7c7b\u9002\u5e94\u548c\u8fdb\u5316\u673a\u5236\u7814\u7a76\uff0c\u8fdb\u4e00\u6b65\u9610\u8ff0\u8d85\u5fae\u85fb\u5728\u6e56\u6cca\u7cfb\u7edf\u4e2d\u626e\u6f14\u7684\u751f\u6001\u89d2\u8272\u3002<\/p>\n<p>\u76f8\u5173\u7814\u7a76\u6210\u679c\u4ee5\u201cGenome analyses provide insights into the evolution and adaptation of the eukaryotic Picophytoplankton Mychonastes homosphaera\u201d\u4e3a\u9898\u53d1\u8868\u5728BMC Genomics\uff08DOI:10.1186\/s12864-020-06891-6\uff09\u3002\u76f8\u5173\u7814\u7a76\u5de5\u4f5c\u5f97\u5230\u4e86\u56fd\u5bb6\u81ea\u7136\u79d1\u5b66\u57fa\u91d1\u9879\u76ee\u8d44\u52a9\u3002\u57fa\u56e0\u7ec4\u4fe1\u606f\u5b58\u50a8\u4e8eNCBI\u6570\u636e\u5e93\u4e2d\uff08BioProject number\uff1aPRJNA556117\uff09\u3002<\/p>\n<figure id=\"attachment_7609\" aria-describedby=\"caption-attachment-7609\" style=\"width: 640px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/4441cb39dbb6fd7f6b946b349a861f962b378b.jpeg\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-7609\" src=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/4441cb39dbb6fd7f6b946b349a861f962b378b.jpeg\" alt=\"\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210\" width=\"640\" height=\"363\" srcset=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/4441cb39dbb6fd7f6b946b349a861f962b378b.jpeg 640w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/4441cb39dbb6fd7f6b946b349a861f962b378b-600x340.jpeg 600w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/4441cb39dbb6fd7f6b946b349a861f962b378b-300x170.jpeg 300w\" sizes=\"(max-width: 640px) 100vw, 640px\" \/><\/a><figcaption id=\"caption-attachment-7609\" class=\"wp-caption-text\">\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210<\/figcaption><\/figure>\n<figure id=\"attachment_7610\" aria-describedby=\"caption-attachment-7610\" style=\"width: 640px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/55598d1001e91141c97b86b056eb55e7978e.jpeg\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-7610\" src=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/55598d1001e91141c97b86b056eb55e7978e.jpeg\" alt=\"\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210\" width=\"640\" height=\"413\" srcset=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/55598d1001e91141c97b86b056eb55e7978e.jpeg 640w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/55598d1001e91141c97b86b056eb55e7978e-600x387.jpeg 600w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/55598d1001e91141c97b86b056eb55e7978e-300x194.jpeg 300w\" sizes=\"(max-width: 640px) 100vw, 640px\" \/><\/a><figcaption id=\"caption-attachment-7610\" class=\"wp-caption-text\">\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210<\/figcaption><\/figure>\n<figure id=\"attachment_7611\" aria-describedby=\"caption-attachment-7611\" style=\"width: 640px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/111838ba61ea8d3fd1f10286faf0df0081894ca5f43.jpeg\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-7611\" src=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/111838ba61ea8d3fd1f10286faf0df0081894ca5f43.jpeg\" alt=\"\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210\" width=\"640\" height=\"481\" srcset=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/111838ba61ea8d3fd1f10286faf0df0081894ca5f43.jpeg 640w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/111838ba61ea8d3fd1f10286faf0df0081894ca5f43-600x451.jpeg 600w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/111838ba61ea8d3fd1f10286faf0df0081894ca5f43-300x225.jpeg 300w\" sizes=\"(max-width: 640px) 100vw, 640px\" \/><\/a><figcaption id=\"caption-attachment-7611\" class=\"wp-caption-text\">\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210<\/figcaption><\/figure>\n<figure id=\"attachment_7612\" aria-describedby=\"caption-attachment-7612\" style=\"width: 556px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/33318972b5426c3cfdb73568e9f510ad8.jpeg\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-7612\" src=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/33318972b5426c3cfdb73568e9f510ad8.jpeg\" alt=\"\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210\" width=\"556\" height=\"606\" srcset=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/33318972b5426c3cfdb73568e9f510ad8.jpeg 556w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/33318972b5426c3cfdb73568e9f510ad8-275x300.jpeg 275w\" sizes=\"(max-width: 556px) 100vw, 556px\" \/><\/a><figcaption id=\"caption-attachment-7612\" class=\"wp-caption-text\">\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210<\/figcaption><\/figure>\n<figure id=\"attachment_7613\" aria-describedby=\"caption-attachment-7613\" style=\"width: 597px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/222755463912c6184eb8813cdce.jpeg\"><img loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-7613\" src=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/222755463912c6184eb8813cdce.jpeg\" alt=\"\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210\" width=\"597\" height=\"606\" srcset=\"https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/222755463912c6184eb8813cdce.jpeg 597w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/222755463912c6184eb8813cdce-296x300.jpeg 296w, https:\/\/www.leadingtec.cn\/wp-content\/uploads\/2020\/09\/222755463912c6184eb8813cdce-90x90.jpeg 90w\" sizes=\"(max-width: 597px) 100vw, 597px\" \/><\/a><figcaption id=\"caption-attachment-7613\" class=\"wp-caption-text\">\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210<\/figcaption><\/figure>\n","protected":false},"excerpt":{"rendered":"<p>\u6de1\u6c34\u8d85\u5fae\u771f\u6838\u85fb\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u9996\u6b21\u5b8c\u6210 \u3000\u3000\u8d85\u5fae\u578b\u6d6e\u6e38\u85fb\u7c7b\uff08\u7c92\u5f84\u22643\u03bcm\uff09\u7b80\u79f0\u8d85\u5fae\u85fb\uff0c\u5e7f\u6cdb\u5206\u5e03\u4e8e\u6d77\u6d0b\u548c\u6de1\u6c34\u751f\u6001\u7cfb\u7edf\u4e2d\uff0c\u5728\u6c34\u751f\u751f\u6001\u7cfb\u7edf\u5c24\u5176\u662f\u5fae\u98df\u7269\u73af\u4e2d\u8d77\u7740\u91cd\u8981\u4f5c\u7528\u3002\u5b83\u4eec\u5177\u6709\u66f4\u9ad8\u7684CO2\u56fa\u5b9a\u6548\u7387\uff0c\u5bf9\u6c34\u4f53\u521d\u7ea7\u751f\u4ea7\u529b\u7684\u8d21\u732e\u91cf\u53ef\u9ad8\u8fbe90%\uff0c\u5e76\u4e14\u5176\u6f5c\u5728\u7684\u6df7\u5408\u8425\u517b\u4ee3\u8c22\u529f\u80fd\u5bf9\u6d6e\u6e38\u7ec6\u83cc\u7684\u79cd\u7fa4\u5177\u6709\u91cd\u8981\u8c03\u63a7\u4f5c\u7528\u3002Mychonastes homosphaera\u662f\u957f\u6c5f\u4e2d\u4e0b\u6e38\u5bcc\u8425\u517b\u5316\u6e56\u6cca\uff08\u5de2\u6e56\uff0c\u9131\u9633\u6e56\uff09\u5e38\u89c1\u7684\u4f18\u52bf\u8d85\u5fae\u771f\u6838\u85fb\uff0c\u4f46\u5176 [&hellip;]<\/p>\n","protected":false},"author":70,"featured_media":7611,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[4],"tags":[140],"class_list":["post-7608","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-info","tag-140"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/posts\/7608"}],"collection":[{"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/users\/70"}],"replies":[{"embeddable":true,"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/comments?post=7608"}],"version-history":[{"count":0,"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/posts\/7608\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/media\/7611"}],"wp:attachment":[{"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/media?parent=7608"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/categories?post=7608"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.leadingtec.cn\/wp-json\/wp\/v2\/tags?post=7608"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}